STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV42962.1Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (402 aa)    
Predicted Functional Partners:
macB
Macrolide transport system ATP-binding/permease; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.999
EFV42960.1
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein.
 0.977
EFV42733.1
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter.
 
 0.800
EFV45425.1
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter.
 
 0.798
EFV42959.1
Hypothetical protein.
       0.773
EFV46123.1
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter.
 
 0.750
EFV45448.1
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter.
 
 0.748
EFV45393.1
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein.
 
 0.721
EFV45426.1
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein.
 
 0.721
EFV46051.2
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
   0.669
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.