STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV43004.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
EFV42999.1
Oxygen-independent coproporphyrinogen III oxidase.
  
 0.970
EFV43005.1
Hypothetical protein.
 
     0.837
EFV43000.1
TonB-dependent heme/hemoglobin receptor family protein.
 
  
 0.788
EFV43002.1
Hypothetical protein.
 
     0.722
EFV43003.1
Cobalt/nickel transport system ATP-binding protein.
 
     0.673
EFV43006.1
Biopolymer transporter ExbB.
 
    0.657
EFV43007.1
Hypothetical protein.
  
  
 0.628
EFV43008.2
TonB family domain-containing protein.
  
    0.595
EFV46157.1
Precorrin-4 C11-methyltransferase.
    
  0.582
EFV44998.1
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
    
  0.582
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.