STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV42881.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
EFV42880.1
Hypothetical protein.
 
     0.952
EFV42875.1
Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.926
EFV42876.1
Carboxylesterase.
 
     0.863
EFV42879.2
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.863
EFV42874.2
2,3-diketo-5-methylthio-1-phosphopentane phosphatase.
 
     0.832
EFV45795.1
Proline dehydrogenase/delta 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
 0.800
EFV45278.1
Acetylornithine/succinylornithine family transaminase.
 
 0.722
EFV45615.1
VCBS protein.
  
     0.635
EFV43024.1
Hypothetical protein.
     
 0.624
EFV44325.1
Hypothetical protein.
  
     0.602
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.