Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV42832.1Capsular polysaccharide export protein. (399 aa)    
Predicted Functional Partners:
EFV42831.2
Capsular polysaccharide export protein.
   
 0.981
EFV42826.2
BexC/CtrB/KpsE family polysaccharide export inner-membrane protein.
 
 
 
 0.838
EFV42824.1
Capsular polysaccharide transport system permease.
 
   
 0.813
EFV42825.1
Capsular polysaccharide transport system ATP-binding protein.
 
   
 0.809
EFV42827.2
Hypothetical protein.
 
   
 0.803
EFV43138.2
Hypothetical protein.
 
   
 0.798
EFV43146.1
KpsF/GutQ family sugar isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.489
EFV42595.1
Hypothetical protein.
  
     0.448
EFV42822.1
KpsF/GutQ family sugar isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
 
   
 0.443
EFV44057.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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