Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV42820.2Hypothetical protein. (257 aa)    
Predicted Functional Partners:
EFV42821.2
Biopolymer transporter ExbD.
 
 
 0.972
EPC05704.1
Hypothetical protein.
 
 
 0.927
EFV43007.1
Hypothetical protein.
  
 
 0.899
EFV42795.1
TonB family domain-containing protein.
  
 
 0.889
EFV43697.1
Protein TolR.
 
 
 0.882
EFV43008.2
TonB family domain-containing protein.
  
 
 0.784
EFV42819.2
Hypothetical protein.
  
  
 0.763
EFV44613.1
Lipopolysaccharide export system ATP-binding protein.
  
   
 0.747
EFV44506.1
Hypothetical protein.
 
  
 0.664
EFV45509.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
     0.623
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.