Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV42753.2Hypothetical protein. (340 aa)    
Predicted Functional Partners:
EFV42752.2
Hypothetical protein.
 
    
0.838
EFV42751.1
Hypothetical protein.
  
  
 0.808
EFV46012.2
Hypothetical protein.
  
     0.766
EFV42749.1
Hypothetical protein.
       0.746
EFV42750.1
Hypothetical protein.
       0.746
EFV44673.1
Hypothetical protein.
  
  
 0.645
EFV44682.1
Hypothetical protein.
  
  
 0.643
EFV44683.1
Phage tail protein I.
  
  
 0.638
EFV44680.1
Hypothetical protein.
  
  
 0.637
EFV44681.1
Hypothetical protein.
  
  
 0.633
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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