Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFV42763.1Hypothetical protein. (275 aa)    
Predicted Functional Partners:
EFV42764.1
Hypothetical protein.
       0.682
EFV42765.1
Hypothetical protein.
       0.636
EFV42766.1
Hypothetical protein.
       0.613
EPC05886.1
Hypothetical protein.
       0.597
EFV42762.2
Hypothetical protein.
       0.541
EFV42761.1
Hypothetical protein.
       0.497
EFV42770.1
Hypothetical protein.
       0.426
EPC05885.1
Hypothetical protein.
       0.426
EFV42771.1
Anaerobic ribonucleoside-triphosphate reductase.
       0.421
EFV42772.1
Hypothetical protein.
       0.421
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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