STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV42565.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
EFV43562.1
NADH oxidase.
   
 0.892
EFV44304.2
Hypothetical protein.
   
 0.889
EFV42567.1
Hypothetical protein.
 
 
 0.823
EFV44892.1
Tat (twin-arginine translocation) pathway signal sequence.
    
   0.806
EFV44893.1
Periplasmic [Fe] hydrogenase large subunit.
    
   0.806
EFV44880.1
Hypothetical protein.
    
   0.750
EFV44625.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.675
EFV44716.1
Hypothetical protein.
    
 0.669
EFV45275.2
Dolichyl-diphosphooligosaccharide-protein glycosyltransferase.
  
     0.652
EFV44031.1
Hypothetical protein.
    
 0.569
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.