STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV42569.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
EPC05824.1
Hypothetical protein.
      0.967
EPC05823.1
Hypothetical protein.
      0.965
ugpE
Sn-glycerol 3-phosphate transport system permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
 0.930
EFV45534.1
Sn-glycerol 3-phosphate transport system permease.
  
 0.922
EFV45532.1
Sn-glycerol 3-phosphate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.767
EFV45027.1
Tungstate transport system ATP-binding protein.
  
 0.767
EFV43572.1
Hypothetical protein.
   
 
  0.562
EFV42571.2
Hypothetical protein.
       0.463
EPC05822.1
Hypothetical protein.
       0.446
Your Current Organism:
Bilophila wadsworthia
NCBI taxonomy Id: 563192
Other names: B. wadsworthia 3_1_6, Bilophila wadsworthia 3_1_6, Bilophila wadsworthia str. 3_1_6, Bilophila wadsworthia strain 3_1_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.