STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZE11780.1Metalloendopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)    
Predicted Functional Partners:
KZE11551.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.961
KZE11742.1
Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.911
KZE11534.1
Signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.825
KZE11533.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.816
KZE11535.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.813
KZE11779.1
Nicotinate-nicotinamide nucleotide adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.803
KZE11532.1
Ribosome-associated protein IOJAP; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.803
proA
Gamma-glutamyl-phosphate reductase; Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.777
KZE11536.1
Disulfide bond formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.700
KZE11537.1
Ubiquinone biosynthesis protein UbiB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.654
Your Current Organism:
Sphingomonas hankookensis
NCBI taxonomy Id: 563996
Other names: CCUG 57509, KCTC 22579, S. hankookensis, Sphingomonas hankookensis Yoon et al. 2009, Sphingomonas sp. ODN7, strain ODN7
Server load: medium (58%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.