STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZE11684.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (715 aa)    
Predicted Functional Partners:
KZE18602.1
Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.958
KZE11666.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.950
KZE17796.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 
0.916
KZE18937.1
Peptidase S11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.912
KZE08580.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.903
KZE18870.1
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.866
KZE11681.1
Stilbene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
KZE11682.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
KZE11683.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
KZE18607.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.756
Your Current Organism:
Sphingomonas hankookensis
NCBI taxonomy Id: 563996
Other names: CCUG 57509, KCTC 22579, S. hankookensis, Sphingomonas hankookensis Yoon et al. 2009, Sphingomonas sp. ODN7, strain ODN7
Server load: high (82%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.