Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZE16093.1 | KZE16264.1 | AVT10_12735 | AVT10_12250 | Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
KZE16263.1 | KZE16264.1 | AVT10_12245 | AVT10_12250 | DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.625 |
KZE16263.1 | KZE16265.1 | AVT10_12245 | AVT10_12255 | DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.489 |
KZE16264.1 | KZE16093.1 | AVT10_12250 | AVT10_12735 | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
KZE16264.1 | KZE16263.1 | AVT10_12250 | AVT10_12245 | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.625 |
KZE16264.1 | KZE16265.1 | AVT10_12250 | AVT10_12255 | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
KZE16264.1 | KZE18003.1 | AVT10_12250 | AVT10_09420 | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenylyltransferase; In Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; Derived by automated computational analysis using g [...] | 0.542 |
KZE16264.1 | KZE18801.1 | AVT10_12250 | AVT10_01810 | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
KZE16265.1 | KZE16263.1 | AVT10_12255 | AVT10_12245 | Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.489 |
KZE16265.1 | KZE16264.1 | AVT10_12255 | AVT10_12250 | Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
KZE18003.1 | KZE16264.1 | AVT10_09420 | AVT10_12250 | Adenylyltransferase; In Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; Derived by automated computational analysis using g [...] | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.542 |
KZE18801.1 | KZE16264.1 | AVT10_01810 | AVT10_12250 | TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |