Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZE10890.1 | KZE15985.1 | AVT10_05935 | AVT10_12830 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.432 |
KZE10895.1 | KZE15985.1 | AVT10_05965 | AVT10_12830 | DNA cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.471 |
KZE10895.1 | KZE18582.1 | AVT10_05965 | AVT10_00570 | DNA cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
KZE11217.1 | KZE15985.1 | AVT10_17150 | AVT10_12830 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.603 |
KZE15985.1 | KZE10890.1 | AVT10_12830 | AVT10_05935 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.432 |
KZE15985.1 | KZE10895.1 | AVT10_12830 | AVT10_05965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
KZE15985.1 | KZE11217.1 | AVT10_12830 | AVT10_17150 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.603 |
KZE15985.1 | KZE18582.1 | AVT10_12830 | AVT10_00570 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.523 |
KZE18582.1 | KZE10895.1 | AVT10_00570 | AVT10_05965 | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
KZE18582.1 | KZE15985.1 | AVT10_00570 | AVT10_12830 | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.523 |