STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZE14661.1Cell division protein FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology. (653 aa)    
Predicted Functional Partners:
KZE14981.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
KZE14982.1
Protease modulator HflC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.993
KZE18900.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.977
KZE18967.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.974
KZE15285.1
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.974
groEL
Molecular chaperone GroEL; 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; Derived by autom [...]
  
 0.947
KZE15797.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.946
KZE17295.1
50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.942
KZE15290.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.941
rplB
50S ribosomal protein L2; One of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.940
Your Current Organism:
Sphingomonas hankookensis
NCBI taxonomy Id: 563996
Other names: CCUG 57509, KCTC 22579, S. hankookensis, Sphingomonas hankookensis Yoon et al. 2009, Sphingomonas sp. ODN7, strain ODN7
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