STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3579_g3154Protein SLY1; Belongs to the STXBP/unc-18/SEC1 family. (660 aa)    
Predicted Functional Partners:
AWRI3579_g3694
Protein transport protein BET1.
   
 0.999
AWRI3579_g1967
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.999
AWRI3579_g1484
Integral membrane protein SED5; Belongs to the syntaxin family.
    
 0.996
AWRI3579_g1230
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
    
 0.993
AWRI3579_g3554
Vesicular-fusion protein SEC17.
    
 0.989
AWRI3579_g2322
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 
 0.981
AWRI3579_g2122
Vesicular-fusion protein SEC18.
   
 0.968
AWRI3579_g2004
Protein transport protein SEC22; Belongs to the synaptobrevin family.
   
 0.966
AWRI3579_g2512
Syntaxin UFE1.
    
 
 0.913
AWRI3579_g1385
Protein transport protein SFT1.
   
 0.912
Your Current Organism:
Hanseniaspora osmophila
NCBI taxonomy Id: 56408
Other names: ATCC 24231, CBS 313, CCRC 21475, CCRC:21475, DBVPG 6795, H. osmophila, IFO 10832, KCTC 7680, Kloeckeraspora osmophila
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