STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3579_g2392Bud site selection protein 27. (1098 aa)    
Predicted Functional Partners:
AWRI3579_g3730
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.773
AWRI3579_g3897
Nucleoporin NSP1.
    
 0.730
AWRI3579_g690
Nucleoporin NSP1.
    
 0.730
AWRI3579_g2361
Nucleoporin NUP2.
    
 0.688
AWRI3579_g3979
Auxilin-like clathrin uncoating factor SWA2.
    
 0.677
AWRI3579_g545
COMPASS component SWD1.
    
 0.665
AWRI3579_g4000
COMPASS component BRE2.
    
 0.660
AWRI3579_g2957
Prefoldin subunit 6.
    
 
 0.656
AWRI3579_g727
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
   
 0.630
AWRI3579_g2367
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.629
Your Current Organism:
Hanseniaspora osmophila
NCBI taxonomy Id: 56408
Other names: ATCC 24231, CBS 313, CCRC 21475, CCRC:21475, DBVPG 6795, H. osmophila, IFO 10832, KCTC 7680, Kloeckeraspora osmophila
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