STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3579_g2013Rhomboid protein 2. (367 aa)    
Predicted Functional Partners:
AWRI3579_g3450
Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit.
   
 
  0.725
AWRI3579_g2914
Cell division control protein 48; Belongs to the AAA ATPase family.
    
 
 0.705
AWRI3579_g1265
ATPase family gene 2 protein.
    
 
 0.602
AWRI3579_g4628
Rhomboid protein 1, mitochondrial.
      
 0.487
AWRI3579_g4117
Putative transcription factor HMS1.
    
 
 0.411
AWRI3579_g4276
Cystine transporter.
    
   0.408
AWRI3579_g2350
GTP-binding protein ypt1.
    
 
 0.408
AWRI3579_g1056
Copper transport protein CTR2.
    
   0.405
Your Current Organism:
Hanseniaspora osmophila
NCBI taxonomy Id: 56408
Other names: ATCC 24231, CBS 313, CCRC 21475, CCRC:21475, DBVPG 6795, H. osmophila, IFO 10832, KCTC 7680, Kloeckeraspora osmophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.