STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3579_g1745Protein ROT1; Required for normal levels of the cell wall 1,6-beta-glucan. Involved in a protein folding machinery chaperoning proteins acting in various physiological processes including cell wall synthesis and lysis of autophagic bodies; Belongs to the ROT1 family. (285 aa)    
Predicted Functional Partners:
AWRI3579_g4562
Beta-glucan synthesis-associated protein KRE6.
  
 
 
 0.627
AWRI3579_g2558
Protein BIG1.
    
 
 0.606
AWRI3579_g1298
Cell wall synthesis protein KRE9.
  
 
 0.565
AWRI3579_g261
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
    0.547
AWRI3579_g1505
Cell wall synthesis protein KRE9.
  
 
 0.525
AWRI3579_g1764
Glucosidase 2 subunit alpha; Belongs to the glycosyl hydrolase 31 family.
    
 
 0.494
AWRI3579_g541
Mannosyl-oligosaccharide glucosidase.
    
 
 0.412
AWRI3579_g2028
Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family.
   
   0.410
AWRI3579_g3923
Glucose-regulated; Belongs to the heat shock protein 70 family.
   
   0.402
AWRI3579_g3266
Mannosyl phosphorylinositol ceramide synthase CSH1.
  
     0.402
Your Current Organism:
Hanseniaspora osmophila
NCBI taxonomy Id: 56408
Other names: ATCC 24231, CBS 313, CCRC 21475, CCRC:21475, DBVPG 6795, H. osmophila, IFO 10832, KCTC 7680, Kloeckeraspora osmophila
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