STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3579_g1288Uncharacterized protein. (660 aa)    
Predicted Functional Partners:
AWRI3579_g3282
Urea amidolyase.
   
 
 0.822
AWRI3579_g542
Tryptophan synthase.
     
 0.820
AWRI3579_g1224
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.761
AWRI3579_g653
Secretory component protein SHR3.
   
 0.681
AWRI3579_g8
DASH complex subunit SPC34.
   
 0.681
AWRI3579_g685
Uncharacterized protein.
   
 0.667
AWRI3579_g2247
Protein phosphatase PP2A regulatory subunit A.
    
 0.594
AWRI3579_g524
Nicotinamidase.
   
 0.591
AWRI3579_g268
Nucleoporin.
   
 0.590
AWRI3579_g662
Putative mitochondrial hydrolase FMP41.
   
 
 0.575
Your Current Organism:
Hanseniaspora osmophila
NCBI taxonomy Id: 56408
Other names: ATCC 24231, CBS 313, CCRC 21475, CCRC:21475, DBVPG 6795, H. osmophila, IFO 10832, KCTC 7680, Kloeckeraspora osmophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.