STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3579_g1396Ubiquitin-binding protein CUE2. (500 aa)    
Predicted Functional Partners:
AWRI3579_g2317
Polyubiquitin.
    
   0.814
AWRI3579_g3149
Ubiquitin-40S ribosomal protein S27a.
    
   0.719
AWRI3579_g1224
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.594
AWRI3579_g3571
Ubiquitin-60S ribosomal protein L40.
    
   0.580
AWRI3579_g2009
RNA polymerase I-specific transcription initiation factor RRN11.
   
   0.558
AWRI3579_g1141
Cytochrome b-c1 complex subunit 9.
   
   0.541
AWRI3579_g777
Calcium-binding mitochondrial carrier SAL1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.508
AWRI3579_g1135
RNA polymerase I-specific transcription initiation factor RRN7.
    
   0.497
AWRI3579_g3688
Protein FMP52, mitochondrial.
   
   0.457
AWRI3579_g4553
Cytochrome b-c1 complex subunit 6.
   
   0.453
Your Current Organism:
Hanseniaspora osmophila
NCBI taxonomy Id: 56408
Other names: ATCC 24231, CBS 313, CCRC 21475, CCRC:21475, DBVPG 6795, H. osmophila, IFO 10832, KCTC 7680, Kloeckeraspora osmophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.