STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3579_g451TATA-box-binding protein. (243 aa)    
Predicted Functional Partners:
AWRI3579_g4185
Transcription initiation factor TFIID subunit 11.
   
 0.999
AWRI3579_g3634
Transcription initiation factor TFIID subunit 7.
    
 0.999
AWRI3579_g3670
Transcription initiation factor IIB.
   
 0.999
AWRI3579_g3292
Transcription initiation factor TFIID subunit 5.
    
 0.999
AWRI3579_g2030
Transcription initiation factor TFIID subunit 6.
   
 0.999
AWRI3579_g2089
Transcription initiation factor TFIID subunit 9.
    
 0.999
AWRI3579_g1832
Transcription initiation factor TFIID subunit 4.
    
 0.999
AWRI3579_g1074
Transcription factor IIIB subunit.
   
 0.999
AWRI3579_g1588
Transcription initiation factor TFIID subunit 2.
    
 0.999
AWRI3579_g1024
Transcription initiation factor TFIID subunit 1.
    
 0.999
Your Current Organism:
Hanseniaspora osmophila
NCBI taxonomy Id: 56408
Other names: ATCC 24231, CBS 313, CCRC 21475, CCRC:21475, DBVPG 6795, H. osmophila, IFO 10832, KCTC 7680, Kloeckeraspora osmophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.