STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3579_g58Sec sixty-one; Belongs to the SecY/SEC61-alpha family. (483 aa)    
Predicted Functional Partners:
AWRI3579_g430
Protein transport protein SSS1.
   
 0.995
AWRI3579_g1292
Protein transport protein SEC61.
  
 
 
0.978
AWRI3579_g3385
60S ribosomal protein L5.
  
 
 0.965
AWRI3579_g2381
60S ribosomal protein L26-B.
  
 
 0.965
AWRI3579_g3759
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.962
AWRI3579_g2972
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.960
AWRI3579_g2253
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.960
AWRI3579_g674
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.959
AWRI3579_g3522
37S ribosomal protein MRP2, mitochondrial.
  
 
 0.958
AWRI3579_g2898
60S ribosomal protein L35-B.
  
 
 0.957
Your Current Organism:
Hanseniaspora osmophila
NCBI taxonomy Id: 56408
Other names: ATCC 24231, CBS 313, CCRC 21475, CCRC:21475, DBVPG 6795, H. osmophila, IFO 10832, KCTC 7680, Kloeckeraspora osmophila
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