STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWRI3579_g119Protein ROD1. (963 aa)    
Predicted Functional Partners:
AWRI3579_g2854
E3 ubiquitin-protein ligase.
    
 
 0.655
AWRI3579_g4289
Thioredoxin; Belongs to the thioredoxin family.
    
 0.615
AWRI3579_g1310
Thioredoxin; Belongs to the thioredoxin family.
    
 0.615
AWRI3579_g397
Bud site selection protein RAX2.
    
 
 0.563
AWRI3579_g4075
Non-specific serine/threonine protein kinase.
    
 
 0.521
AWRI3579_g3695
ER-retained PMA1-suppressing protein 1.
    
 0.458
AWRI3579_g3726
Protein disulfide isomerase MPD2.
    
 0.458
AWRI3579_g3148
Phosducin-like protein 1.
    
 0.458
AWRI3579_g2778
Protein disulfide-isomerase MPD1.
    
 0.458
AWRI3579_g1636
Protein disulfide-isomerase.
    
 0.458
Your Current Organism:
Hanseniaspora osmophila
NCBI taxonomy Id: 56408
Other names: ATCC 24231, CBS 313, CCRC 21475, CCRC:21475, DBVPG 6795, H. osmophila, IFO 10832, KCTC 7680, Kloeckeraspora osmophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.