STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK04143.1Chaperone TorD involved in molybdoenzyme TorA maturation. (203 aa)    
Predicted Functional Partners:
SHK04203.1
4Fe-4S binding domain-containing protein.
 
  
 0.956
SHK04184.1
Protein of unknown function.
 
    0.906
SHK04158.1
Protein of unknown function.
 
     0.905
SHK04087.1
Formate dehydrogenase beta subunit.
 
  
 0.903
SHK04122.1
Formate dehydrogenase region TAT target.
 
     0.903
SHK04104.1
Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.896
SHK04071.1
Formate dehydrogenase gamma subunit.
 
  
 0.894
SHK04268.1
Hypothetical protein.
 
     0.869
SHK04242.1
Biotin-(acetyl-CoA carboxylase) ligase.
 
     0.867
fdhD
FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.816
Your Current Organism:
Marinobacter antarcticus
NCBI taxonomy Id: 564117
Other names: CGMCC 1.10835, KCTC 23684, M. antarcticus, Marinobacter antarcticus Liu et al. 2012, Marinobacter sp. ZS2-30, strain ZS2-30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.