Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHK08639.1 | SHK08658.1 | SAMN05216369_0357 | SAMN05216369_0358 | DNA-3-methyladenine glycosylase I. | Uncharacterized membrane protein YfcC, ion transporter superfamily. | 0.472 |
| SHK08658.1 | SHK08639.1 | SAMN05216369_0358 | SAMN05216369_0357 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | DNA-3-methyladenine glycosylase I. | 0.472 |
| SHK08658.1 | SHK08711.1 | SAMN05216369_0358 | SAMN05216369_0360 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.904 |
| SHK08658.1 | SHK08727.1 | SAMN05216369_0358 | SAMN05216369_0361 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.906 |
| SHK08658.1 | SHK08801.1 | SAMN05216369_0358 | SAMN05216369_0364 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | ATP synthase protein I. | 0.475 |
| SHK08658.1 | SHK08813.1 | SAMN05216369_0358 | SAMN05216369_0365 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | F1/F0 ATPase, subunit 2. | 0.474 |
| SHK08658.1 | arcA | SAMN05216369_0358 | SAMN05216369_0359 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | Arginine deiminase. | 0.929 |
| SHK08658.1 | atpC | SAMN05216369_0358 | SAMN05216369_0363 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.475 |
| SHK08658.1 | atpD | SAMN05216369_0358 | SAMN05216369_0362 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.474 |
| SHK08658.1 | atpE | SAMN05216369_0358 | SAMN05216369_0367 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.476 |
| SHK08658.1 | atpF | SAMN05216369_0358 | SAMN05216369_0368 | Uncharacterized membrane protein YfcC, ion transporter superfamily. | ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.473 |
| SHK08711.1 | SHK08658.1 | SAMN05216369_0360 | SAMN05216369_0358 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Uncharacterized membrane protein YfcC, ion transporter superfamily. | 0.904 |
| SHK08711.1 | SHK08727.1 | SAMN05216369_0360 | SAMN05216369_0361 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.999 |
| SHK08711.1 | SHK08801.1 | SAMN05216369_0360 | SAMN05216369_0364 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ATP synthase protein I. | 0.613 |
| SHK08711.1 | SHK08813.1 | SAMN05216369_0360 | SAMN05216369_0365 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | F1/F0 ATPase, subunit 2. | 0.613 |
| SHK08711.1 | arcA | SAMN05216369_0360 | SAMN05216369_0359 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine deiminase. | 0.999 |
| SHK08711.1 | atpC | SAMN05216369_0360 | SAMN05216369_0363 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.628 |
| SHK08711.1 | atpD | SAMN05216369_0360 | SAMN05216369_0362 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.633 |
| SHK08711.1 | atpE | SAMN05216369_0360 | SAMN05216369_0367 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.623 |
| SHK08711.1 | atpF | SAMN05216369_0360 | SAMN05216369_0368 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.613 |
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