node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK05619.1 | SHK17755.1 | SAMN05216369_0211 | SAMN05216369_0822 | Hypothetical protein. | Outer membrane insertion C-terminal signal. | 0.672 |
SHK05619.1 | SHK19611.1 | SAMN05216369_0211 | SAMN05216369_0916 | Hypothetical protein. | Uncharacterized conserved protein YdgA, DUF945 family. | 0.767 |
SHK17755.1 | SHK05619.1 | SAMN05216369_0822 | SAMN05216369_0211 | Outer membrane insertion C-terminal signal. | Hypothetical protein. | 0.672 |
SHK17755.1 | SHK19611.1 | SAMN05216369_0822 | SAMN05216369_0916 | Outer membrane insertion C-terminal signal. | Uncharacterized conserved protein YdgA, DUF945 family. | 0.713 |
SHK17755.1 | SHK75162.1 | SAMN05216369_0822 | SAMN05216369_3032 | Outer membrane insertion C-terminal signal. | Serine protease Do; Belongs to the peptidase S1C family. | 0.739 |
SHK17755.1 | SHK82765.1 | SAMN05216369_0822 | SAMN05216369_3294 | Outer membrane insertion C-terminal signal. | Periplasmic chaperone for outer membrane proteins Skp. | 0.954 |
SHK17755.1 | rplW | SAMN05216369_0822 | SAMN05216369_3473 | Outer membrane insertion C-terminal signal. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.658 |
SHK17755.1 | rplX | SAMN05216369_0822 | SAMN05216369_3464 | Outer membrane insertion C-terminal signal. | LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.664 |
SHK17755.1 | rplY | SAMN05216369_0822 | SAMN05216369_2957 | Outer membrane insertion C-terminal signal. | LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.657 |
SHK17755.1 | rpsN | SAMN05216369_0822 | SAMN05216369_3462 | Outer membrane insertion C-terminal signal. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.654 |
SHK17755.1 | rpsU | SAMN05216369_0822 | SAMN05216369_0038 | Outer membrane insertion C-terminal signal. | SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family. | 0.656 |
SHK17755.1 | secA | SAMN05216369_0822 | SAMN05216369_2875 | Outer membrane insertion C-terminal signal. | Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.749 |
SHK19611.1 | SHK05619.1 | SAMN05216369_0916 | SAMN05216369_0211 | Uncharacterized conserved protein YdgA, DUF945 family. | Hypothetical protein. | 0.767 |
SHK19611.1 | SHK17755.1 | SAMN05216369_0916 | SAMN05216369_0822 | Uncharacterized conserved protein YdgA, DUF945 family. | Outer membrane insertion C-terminal signal. | 0.713 |
SHK75162.1 | SHK17755.1 | SAMN05216369_3032 | SAMN05216369_0822 | Serine protease Do; Belongs to the peptidase S1C family. | Outer membrane insertion C-terminal signal. | 0.739 |
SHK75162.1 | rplY | SAMN05216369_3032 | SAMN05216369_2957 | Serine protease Do; Belongs to the peptidase S1C family. | LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.660 |
SHK75162.1 | rpsN | SAMN05216369_3032 | SAMN05216369_3462 | Serine protease Do; Belongs to the peptidase S1C family. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.431 |
SHK75162.1 | secA | SAMN05216369_3032 | SAMN05216369_2875 | Serine protease Do; Belongs to the peptidase S1C family. | Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.666 |
SHK82765.1 | SHK17755.1 | SAMN05216369_3294 | SAMN05216369_0822 | Periplasmic chaperone for outer membrane proteins Skp. | Outer membrane insertion C-terminal signal. | 0.954 |
rplW | SHK17755.1 | SAMN05216369_3473 | SAMN05216369_0822 | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | Outer membrane insertion C-terminal signal. | 0.658 |