STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK17981.1Protein SCO1/2. (192 aa)    
Predicted Functional Partners:
SHK11477.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.851
SHK05656.1
Cytochrome bo3 quinol oxidase subunit 2.
  
 
 0.718
SHK59941.1
Thiol-disulfide isomerase or thioredoxin.
  
   0.687
SHK26914.1
Thioredoxin 1.
   
   0.619
SHK27098.1
Thioredoxin 1.
   
   0.619
SHK39338.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
   
   0.619
SHK17997.1
Methyl-accepting chemotaxis sensory transducer.
       0.572
SHK11452.1
Cytochrome c oxidase assembly protein subunit 11.
  
 
 0.560
SHK11367.1
Cytochrome c oxidase assembly protein subunit 15.
  
 
 0.532
SHK10205.1
Di-haem cytochrome c peroxidase.
   
   0.528
Your Current Organism:
Marinobacter antarcticus
NCBI taxonomy Id: 564117
Other names: CGMCC 1.10835, KCTC 23684, M. antarcticus, Marinobacter antarcticus Liu et al. 2012, Marinobacter sp. ZS2-30, strain ZS2-30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.