STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK25123.1Cobalt-zinc-cadmium efflux system protein. (301 aa)    
Predicted Functional Partners:
SHK16488.1
Cu+-exporting ATPase.
  
  
 0.611
SHK25143.1
Phosphoglycolate phosphatase.
       0.524
SHK67382.1
Cu+-exporting ATPase.
 
  
 0.519
SHK42924.1
Cu2+-exporting ATPase.
  
  
 0.453
SHK61805.1
Trimethylamine monooxygenase.
  
    0.404
SHK65033.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
    0.404
SHK66068.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
    0.404
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.401
Your Current Organism:
Marinobacter antarcticus
NCBI taxonomy Id: 564117
Other names: CGMCC 1.10835, KCTC 23684, M. antarcticus, Marinobacter antarcticus Liu et al. 2012, Marinobacter sp. ZS2-30, strain ZS2-30
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