STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK35730.1Phospholipid transport system substrate-binding protein. (217 aa)    
Predicted Functional Partners:
SHK35699.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.998
SHK35754.1
Phospholipid transport system transporter-binding protein.
  
 
 0.997
SHK64907.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 
 0.993
SHK35672.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 
 0.989
SHK64872.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.984
SHK35648.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 
 0.982
SHK64891.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 
 0.974
SHK35776.1
Acid stress-induced BolA-like protein IbaG/YrbA, predicted regulator of iron metabolism; Belongs to the BolA/IbaG family.
       0.747
SHK46683.1
Phospholipid-binding lipoprotein MlaA.
 
 
 
 0.689
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.679
Your Current Organism:
Marinobacter antarcticus
NCBI taxonomy Id: 564117
Other names: CGMCC 1.10835, KCTC 23684, M. antarcticus, Marinobacter antarcticus Liu et al. 2012, Marinobacter sp. ZS2-30, strain ZS2-30
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