STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK36033.1LuxR family transcriptional regulator, maltose regulon positive regulatory protein. (895 aa)    
Predicted Functional Partners:
SHK64251.1
CBS domain-containing protein.
  
  
  0.740
SHK59573.1
AmpE protein.
  
     0.701
SHK19611.1
Uncharacterized conserved protein YdgA, DUF945 family.
  
     0.642
SHK37849.1
Hypothetical protein.
  
     0.615
SHK37202.1
Hypothetical protein.
  
     0.614
SHK39173.1
Hook-length control protein FliK.
  
     0.582
SHK10908.1
7TM diverse intracellular signalling.
  
   
 0.567
SHK35985.1
Protein of unknown function.
 
     0.559
SHK48588.1
Hypothetical protein.
  
     0.557
SHK40500.1
Cyanate permease; Manually curated.
  
     0.542
Your Current Organism:
Marinobacter antarcticus
NCBI taxonomy Id: 564117
Other names: CGMCC 1.10835, KCTC 23684, M. antarcticus, Marinobacter antarcticus Liu et al. 2012, Marinobacter sp. ZS2-30, strain ZS2-30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.