STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK36675.14-alpha-L-fucosyltransferase glycosyl transferase group 56. (349 aa)    
Predicted Functional Partners:
SHK36741.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.936
SHK36725.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.915
SHK75162.1
Serine protease Do; Belongs to the peptidase S1C family.
   
 0.875
SHK36699.1
Galactoside O-acetyltransferase.
 
     0.810
SHK10422.1
Hypothetical protein.
   
 0.788
SHK67369.1
Hypothetical protein.
   
 0.788
SHK36614.1
LPS O-antigen chain length determinant protein, WzzB/FepE family.
     
 0.763
SHK36636.1
dTDP-glucose 4,6-dehydratase.
  
    0.761
SHK36655.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
       0.761
SHK36588.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
       0.754
Your Current Organism:
Marinobacter antarcticus
NCBI taxonomy Id: 564117
Other names: CGMCC 1.10835, KCTC 23684, M. antarcticus, Marinobacter antarcticus Liu et al. 2012, Marinobacter sp. ZS2-30, strain ZS2-30
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