STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK46014.1Glycosyltransferase involved in cell wall bisynthesis. (324 aa)    
Predicted Functional Partners:
SHK46034.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.840
SHK46055.1
Phosphatidylinositol alpha-1,6-mannosyltransferase.
 
 
  0.753
SHK36836.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.603
SHK16094.1
Cytochrome P450.
    
 0.572
SHK45739.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.533
SHK36978.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.532
SHK86585.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.511
SHK46101.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
  
0.487
SHK36902.1
UDP-N-acetylglucosamine 4-epimerase.
 
 
 0.467
SHK45922.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.452
Your Current Organism:
Marinobacter antarcticus
NCBI taxonomy Id: 564117
Other names: CGMCC 1.10835, KCTC 23684, M. antarcticus, Marinobacter antarcticus Liu et al. 2012, Marinobacter sp. ZS2-30, strain ZS2-30
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