Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK12619.1 | SHK36836.1 | SAMN05216369_0562 | SAMN05216369_1716 | 4-amino-4-deoxy-L-arabinose transferase. | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | 0.512 |
SHK12619.1 | SHK64596.1 | SAMN05216369_0562 | SAMN05216369_2614 | 4-amino-4-deoxy-L-arabinose transferase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.766 |
SHK16094.1 | SHK36725.1 | SAMN05216369_0733 | SAMN05216369_1709 | Cytochrome P450. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.738 |
SHK16094.1 | SHK36836.1 | SAMN05216369_0733 | SAMN05216369_1716 | Cytochrome P450. | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | 0.944 |
SHK16094.1 | SHK64596.1 | SAMN05216369_0733 | SAMN05216369_2614 | Cytochrome P450. | Glycosyltransferase involved in cell wall bisynthesis. | 0.572 |
SHK16094.1 | SHK64631.1 | SAMN05216369_0733 | SAMN05216369_2616 | Cytochrome P450. | 2-haloacid dehalogenase. | 0.508 |
SHK16094.1 | SHK86649.1 | SAMN05216369_0733 | SAMN05216369_3418 | Cytochrome P450. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.738 |
SHK36725.1 | SHK16094.1 | SAMN05216369_1709 | SAMN05216369_0733 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | Cytochrome P450. | 0.738 |
SHK36725.1 | SHK36836.1 | SAMN05216369_1709 | SAMN05216369_1716 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | 0.908 |
SHK36725.1 | SHK64596.1 | SAMN05216369_1709 | SAMN05216369_2614 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.487 |
SHK36836.1 | SHK12619.1 | SAMN05216369_1716 | SAMN05216369_0562 | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | 4-amino-4-deoxy-L-arabinose transferase. | 0.512 |
SHK36836.1 | SHK16094.1 | SAMN05216369_1716 | SAMN05216369_0733 | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | Cytochrome P450. | 0.944 |
SHK36836.1 | SHK36725.1 | SAMN05216369_1716 | SAMN05216369_1709 | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.908 |
SHK36836.1 | SHK64577.1 | SAMN05216369_1716 | SAMN05216369_2613 | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.512 |
SHK36836.1 | SHK64596.1 | SAMN05216369_1716 | SAMN05216369_2614 | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.603 |
SHK36836.1 | SHK86649.1 | SAMN05216369_1716 | SAMN05216369_3418 | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.908 |
SHK64542.1 | SHK64561.1 | SAMN05216369_2611 | SAMN05216369_2612 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.975 |
SHK64542.1 | SHK64577.1 | SAMN05216369_2611 | SAMN05216369_2613 | Signal transduction histidine kinase. | Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.788 |
SHK64542.1 | SHK64596.1 | SAMN05216369_2611 | SAMN05216369_2614 | Signal transduction histidine kinase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.804 |
SHK64542.1 | SHK64616.1 | SAMN05216369_2611 | SAMN05216369_2615 | Signal transduction histidine kinase. | Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose). | 0.793 |
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