Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK22432.1 | SHK60127.1 | SAMN05216369_1061 | SAMN05216369_2402 | Fumarase, class II. | Oxaloacetate decarboxylase, alpha subunit. | 0.424 |
SHK22432.1 | SHK63855.1 | SAMN05216369_1061 | SAMN05216369_2576 | Fumarase, class II. | Citrate synthase; Belongs to the citrate synthase family. | 0.970 |
SHK22432.1 | SHK82089.1 | SAMN05216369_1061 | SAMN05216369_3258 | Fumarase, class II. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.990 |
SHK22432.1 | SHK85892.1 | SAMN05216369_1061 | SAMN05216369_3382 | Fumarase, class II. | Glutamate synthase (NADPH/NADH) large chain. | 0.515 |
SHK22432.1 | SHK86081.1 | SAMN05216369_1061 | SAMN05216369_3392 | Fumarase, class II. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.979 |
SHK22432.1 | glcB | SAMN05216369_1061 | SAMN05216369_1951 | Fumarase, class II. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.962 |
SHK22432.1 | mqo | SAMN05216369_1061 | SAMN05216369_1068 | Fumarase, class II. | Malate dehydrogenase (quinone). | 0.953 |
SHK22432.1 | mqo-2 | SAMN05216369_1061 | SAMN05216369_2764 | Fumarase, class II. | Malate dehydrogenase (quinone). | 0.953 |
SHK22432.1 | pckA | SAMN05216369_1061 | SAMN05216369_0784 | Fumarase, class II. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. | 0.629 |
SHK60127.1 | SHK22432.1 | SAMN05216369_2402 | SAMN05216369_1061 | Oxaloacetate decarboxylase, alpha subunit. | Fumarase, class II. | 0.424 |
SHK60127.1 | SHK63855.1 | SAMN05216369_2402 | SAMN05216369_2576 | Oxaloacetate decarboxylase, alpha subunit. | Citrate synthase; Belongs to the citrate synthase family. | 0.912 |
SHK60127.1 | SHK82089.1 | SAMN05216369_2402 | SAMN05216369_3258 | Oxaloacetate decarboxylase, alpha subunit. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.989 |
SHK60127.1 | SHK85892.1 | SAMN05216369_2402 | SAMN05216369_3382 | Oxaloacetate decarboxylase, alpha subunit. | Glutamate synthase (NADPH/NADH) large chain. | 0.982 |
SHK60127.1 | SHK86081.1 | SAMN05216369_2402 | SAMN05216369_3392 | Oxaloacetate decarboxylase, alpha subunit. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.967 |
SHK60127.1 | glcB | SAMN05216369_2402 | SAMN05216369_1951 | Oxaloacetate decarboxylase, alpha subunit. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.886 |
SHK60127.1 | mqo | SAMN05216369_2402 | SAMN05216369_1068 | Oxaloacetate decarboxylase, alpha subunit. | Malate dehydrogenase (quinone). | 0.965 |
SHK60127.1 | mqo-2 | SAMN05216369_2402 | SAMN05216369_2764 | Oxaloacetate decarboxylase, alpha subunit. | Malate dehydrogenase (quinone). | 0.946 |
SHK60127.1 | pckA | SAMN05216369_2402 | SAMN05216369_0784 | Oxaloacetate decarboxylase, alpha subunit. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. | 0.972 |
SHK60127.1 | ppc | SAMN05216369_2402 | SAMN05216369_3048 | Oxaloacetate decarboxylase, alpha subunit. | Phosphoenolpyruvate carboxylase, type 1; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.966 |
SHK63855.1 | SHK22432.1 | SAMN05216369_2576 | SAMN05216369_1061 | Citrate synthase; Belongs to the citrate synthase family. | Fumarase, class II. | 0.970 |
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