STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK80490.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
SHK80515.1
Hypothetical protein.
 
     0.663
SHK66068.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
 
     0.645
SHK09725.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.616
SHK10975.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.614
SHK42780.1
N-acyl-D-aspartate/D-glutamate deacylase.
  
     0.593
SHK65033.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
 
     0.591
SHK06536.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.566
SHK16094.1
Cytochrome P450.
   
  0.566
SHK32556.1
Alkane 1-monooxygenase.
 
     0.550
SHK49057.1
Uncharacterized conserved protein.
  
     0.545
Your Current Organism:
Marinobacter antarcticus
NCBI taxonomy Id: 564117
Other names: CGMCC 1.10835, KCTC 23684, M. antarcticus, Marinobacter antarcticus Liu et al. 2012, Marinobacter sp. ZS2-30, strain ZS2-30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.