STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK80774.1PAS fold. (529 aa)    
Predicted Functional Partners:
SHK05477.1
PAS domain S-box-containing protein.
0.999
SHK05511.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.999
SHK10879.1
Signal transduction histidine kinase.
0.999
SHK10908.1
7TM diverse intracellular signalling.
  
 0.999
SHK43321.1
Signal transduction histidine kinase.
0.999
SHK58372.1
Na+/proline symporter.
 0.999
SHK75350.1
Two-component system, NarL family, sensor histidine kinase BarA.
0.999
SHK75716.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
0.999
SHK16740.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
0.998
SHK22565.1
Two-component system, chemotaxis family, response regulator CheV.
  
 0.998
Your Current Organism:
Marinobacter antarcticus
NCBI taxonomy Id: 564117
Other names: CGMCC 1.10835, KCTC 23684, M. antarcticus, Marinobacter antarcticus Liu et al. 2012, Marinobacter sp. ZS2-30, strain ZS2-30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.