Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW16261.1 | SDW16305.1 | SAMN04488238_101243 | SAMN04488238_101244 | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | Uncharacterized domain 1-containing protein. | 0.566 |
SDW16261.1 | SDW16339.1 | SAMN04488238_101243 | SAMN04488238_101245 | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | Sporulation related domain-containing protein. | 0.555 |
SDW16261.1 | SDW16409.1 | SAMN04488238_101243 | SAMN04488238_101247 | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | Adenosine deaminase. | 0.425 |
SDW16261.1 | SDW16499.1 | SAMN04488238_101243 | SAMN04488238_101249 | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | Thymidine phosphorylase. | 0.425 |
SDW16261.1 | SDW16537.1 | SAMN04488238_101243 | SAMN04488238_101250 | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.425 |
SDW16261.1 | SDX86988.1 | SAMN04488238_101243 | SAMN04488238_13312 | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | Predicted oxidoreductase. | 0.489 |
SDW16261.1 | deoB | SAMN04488238_101243 | SAMN04488238_101248 | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.425 |
SDW16261.1 | upp | SAMN04488238_101243 | SAMN04488238_101246 | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.425 |
SDW16305.1 | SDW16261.1 | SAMN04488238_101244 | SAMN04488238_101243 | Uncharacterized domain 1-containing protein. | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | 0.566 |
SDW16305.1 | SDW16339.1 | SAMN04488238_101244 | SAMN04488238_101245 | Uncharacterized domain 1-containing protein. | Sporulation related domain-containing protein. | 0.757 |
SDW16305.1 | SDW16409.1 | SAMN04488238_101244 | SAMN04488238_101247 | Uncharacterized domain 1-containing protein. | Adenosine deaminase. | 0.564 |
SDW16305.1 | SDW16499.1 | SAMN04488238_101244 | SAMN04488238_101249 | Uncharacterized domain 1-containing protein. | Thymidine phosphorylase. | 0.564 |
SDW16305.1 | SDW16537.1 | SAMN04488238_101244 | SAMN04488238_101250 | Uncharacterized domain 1-containing protein. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.564 |
SDW16305.1 | deoB | SAMN04488238_101244 | SAMN04488238_101248 | Uncharacterized domain 1-containing protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.564 |
SDW16305.1 | upp | SAMN04488238_101244 | SAMN04488238_101246 | Uncharacterized domain 1-containing protein. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.564 |
SDW16339.1 | SDW16261.1 | SAMN04488238_101245 | SAMN04488238_101243 | Sporulation related domain-containing protein. | Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family. | 0.555 |
SDW16339.1 | SDW16305.1 | SAMN04488238_101245 | SAMN04488238_101244 | Sporulation related domain-containing protein. | Uncharacterized domain 1-containing protein. | 0.757 |
SDW16339.1 | SDW16409.1 | SAMN04488238_101245 | SAMN04488238_101247 | Sporulation related domain-containing protein. | Adenosine deaminase. | 0.752 |
SDW16339.1 | SDW16499.1 | SAMN04488238_101245 | SAMN04488238_101249 | Sporulation related domain-containing protein. | Thymidine phosphorylase. | 0.752 |
SDW16339.1 | SDW16537.1 | SAMN04488238_101245 | SAMN04488238_101250 | Sporulation related domain-containing protein. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.752 |
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