STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW16606.1propionyl-CoA synthetase. (629 aa)    
Predicted Functional Partners:
SDX51709.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.930
SDW16568.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 0.913
SDW24382.1
Acyl transferase domain-containing protein.
 
 
 0.900
SDX49803.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.900
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 0.858
SDW44908.1
Phosphate acetyltransferase.
  
 
 0.836
SDW11200.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 0.833
SDX48942.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.830
SDW49196.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.827
SDW67718.1
2-Methylisocitrate lyase, PEP mutase family.
  
 
 0.795
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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