STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW24011.1HAD-superfamily class IIA hydrolase, TIGR01459. (293 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.890
SDX41695.1
Hypothetical protein.
 
  
 0.754
SDW23975.1
Manganese-dependent inorganic pyrophosphatase.
       0.714
SDW24097.1
FMN adenylyltransferase; Belongs to the ribF family.
  
    0.680
SDW24056.1
3-hydroxybutyryl-CoA dehydratase.
       0.673
hisS
histidyl-tRNA synthetase.
 
    0.636
SDW53004.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.607
SDX59114.1
Pyridoxal kinase; Belongs to the pyridoxine kinase family.
 
  
 0.588
SDW24143.1
Hypothetical protein; Belongs to the UPF0260 family.
       0.580
SDX63401.1
dCTP deaminase.
 
    0.579
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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