Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW23975.1 | SDW24011.1 | SAMN04488238_101442 | SAMN04488238_101443 | Manganese-dependent inorganic pyrophosphatase. | HAD-superfamily class IIA hydrolase, TIGR01459. | 0.714 |
SDW23975.1 | SDW24056.1 | SAMN04488238_101442 | SAMN04488238_101444 | Manganese-dependent inorganic pyrophosphatase. | 3-hydroxybutyryl-CoA dehydratase. | 0.460 |
SDW23975.1 | SDW24097.1 | SAMN04488238_101442 | SAMN04488238_101445 | Manganese-dependent inorganic pyrophosphatase. | FMN adenylyltransferase; Belongs to the ribF family. | 0.439 |
SDW23975.1 | SDW24143.1 | SAMN04488238_101442 | SAMN04488238_101446 | Manganese-dependent inorganic pyrophosphatase. | Hypothetical protein; Belongs to the UPF0260 family. | 0.438 |
SDW24011.1 | SDW23975.1 | SAMN04488238_101443 | SAMN04488238_101442 | HAD-superfamily class IIA hydrolase, TIGR01459. | Manganese-dependent inorganic pyrophosphatase. | 0.714 |
SDW24011.1 | SDW24056.1 | SAMN04488238_101443 | SAMN04488238_101444 | HAD-superfamily class IIA hydrolase, TIGR01459. | 3-hydroxybutyryl-CoA dehydratase. | 0.673 |
SDW24011.1 | SDW24097.1 | SAMN04488238_101443 | SAMN04488238_101445 | HAD-superfamily class IIA hydrolase, TIGR01459. | FMN adenylyltransferase; Belongs to the ribF family. | 0.680 |
SDW24011.1 | SDW24143.1 | SAMN04488238_101443 | SAMN04488238_101446 | HAD-superfamily class IIA hydrolase, TIGR01459. | Hypothetical protein; Belongs to the UPF0260 family. | 0.580 |
SDW24011.1 | SDW53004.1 | SAMN04488238_101443 | SAMN04488238_102324 | HAD-superfamily class IIA hydrolase, TIGR01459. | Transcriptional regulator, contains XRE-family HTH domain. | 0.607 |
SDW24011.1 | SDX41695.1 | SAMN04488238_101443 | SAMN04488238_10865 | HAD-superfamily class IIA hydrolase, TIGR01459. | Hypothetical protein. | 0.754 |
SDW24011.1 | SDX59114.1 | SAMN04488238_101443 | SAMN04488238_11120 | HAD-superfamily class IIA hydrolase, TIGR01459. | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | 0.588 |
SDW24011.1 | SDX63401.1 | SAMN04488238_101443 | SAMN04488238_11254 | HAD-superfamily class IIA hydrolase, TIGR01459. | dCTP deaminase. | 0.579 |
SDW24011.1 | glpK | SAMN04488238_101443 | SAMN04488238_101465 | HAD-superfamily class IIA hydrolase, TIGR01459. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.890 |
SDW24011.1 | hisS | SAMN04488238_101443 | SAMN04488238_107176 | HAD-superfamily class IIA hydrolase, TIGR01459. | histidyl-tRNA synthetase. | 0.636 |
SDW24056.1 | SDW23975.1 | SAMN04488238_101444 | SAMN04488238_101442 | 3-hydroxybutyryl-CoA dehydratase. | Manganese-dependent inorganic pyrophosphatase. | 0.460 |
SDW24056.1 | SDW24011.1 | SAMN04488238_101444 | SAMN04488238_101443 | 3-hydroxybutyryl-CoA dehydratase. | HAD-superfamily class IIA hydrolase, TIGR01459. | 0.673 |
SDW24056.1 | SDW24097.1 | SAMN04488238_101444 | SAMN04488238_101445 | 3-hydroxybutyryl-CoA dehydratase. | FMN adenylyltransferase; Belongs to the ribF family. | 0.808 |
SDW24056.1 | SDW24143.1 | SAMN04488238_101444 | SAMN04488238_101446 | 3-hydroxybutyryl-CoA dehydratase. | Hypothetical protein; Belongs to the UPF0260 family. | 0.808 |
SDW24097.1 | SDW23975.1 | SAMN04488238_101445 | SAMN04488238_101442 | FMN adenylyltransferase; Belongs to the ribF family. | Manganese-dependent inorganic pyrophosphatase. | 0.439 |
SDW24097.1 | SDW24011.1 | SAMN04488238_101445 | SAMN04488238_101443 | FMN adenylyltransferase; Belongs to the ribF family. | HAD-superfamily class IIA hydrolase, TIGR01459. | 0.680 |
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