STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW30349.1Protease FtsH subunit HflC; HflC and HflK could regulate a protease. (335 aa)    
Predicted Functional Partners:
SDW30309.1
Protease FtsH subunit HflK; HflC and HflK could encode or regulate a protease.
 
 0.999
SDW51673.1
ATP-dependent Zn proteases.
   
 0.949
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.949
SDX98276.1
Peptidase family M41.
   
 0.949
SDX99504.1
Hypothetical protein.
   
 0.949
SDW30265.1
NADPH-glutathione reductase.
  
   0.760
SDW30866.1
Rhomboid family protein.
   
 0.751
SDW80099.1
Membrane associated serine protease, rhomboid family.
   
 0.751
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
       0.730
SDX19177.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.662
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
Server load: low (18%) [HD]