STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW45133.1Peptide/nickel transport system permease protein. (310 aa)    
Predicted Functional Partners:
SDW45161.1
Peptide/nickel transport system permease protein.
 
  0.965
SDW45067.1
Peptide/nickel transport system substrate-binding protein.
  0.959
SDW45099.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.882
SDX64691.1
Peptide/nickel transport system permease protein.
 
 
  0.860
SDX33237.1
Peptide/nickel transport system permease protein.
 
 
  0.859
SDX64239.1
Peptide/nickel transport system permease protein.
 
 
  0.858
SDW66574.1
Peptide/nickel transport system permease protein.
 
 
  0.857
SDX09454.1
Peptide/nickel transport system permease protein.
 
 
  0.856
SDX32836.1
Peptide/nickel transport system permease protein.
 
 
  0.855
SDX10518.1
Peptide/nickel transport system permease protein.
 
 
  0.851
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.