Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW56971.1 | SDW57009.1 | SAMN04488238_102422 | SAMN04488238_102423 | Hypothetical protein. | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | 0.946 |
SDW56971.1 | SDW57048.1 | SAMN04488238_102422 | SAMN04488238_102424 | Hypothetical protein. | Glutamine synthetase. | 0.786 |
SDW56971.1 | SDW57082.1 | SAMN04488238_102422 | SAMN04488238_102425 | Hypothetical protein. | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein. | 0.716 |
SDW56971.1 | SDW57120.1 | SAMN04488238_102422 | SAMN04488238_102426 | Hypothetical protein. | TRAP transporter, DctM subunit. | 0.625 |
SDW56971.1 | SDW57153.1 | SAMN04488238_102422 | SAMN04488238_102427 | Hypothetical protein. | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | 0.590 |
SDW56971.1 | SDW57192.1 | SAMN04488238_102422 | SAMN04488238_102428 | Hypothetical protein. | Predicted N-formylglutamate amidohydrolase. | 0.551 |
SDW56971.1 | SDW57221.1 | SAMN04488238_102422 | SAMN04488238_102429 | Hypothetical protein. | Transcriptional regulator, RpiR family. | 0.657 |
SDW56971.1 | SDX33810.1 | SAMN04488238_102422 | SAMN04488238_107153 | Hypothetical protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.767 |
SDW57009.1 | SDW56971.1 | SAMN04488238_102423 | SAMN04488238_102422 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.946 |
SDW57009.1 | SDW57048.1 | SAMN04488238_102423 | SAMN04488238_102424 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Glutamine synthetase. | 0.865 |
SDW57009.1 | SDW57082.1 | SAMN04488238_102423 | SAMN04488238_102425 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein. | 0.818 |
SDW57009.1 | SDW57120.1 | SAMN04488238_102423 | SAMN04488238_102426 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | TRAP transporter, DctM subunit. | 0.780 |
SDW57009.1 | SDW57153.1 | SAMN04488238_102423 | SAMN04488238_102427 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | 0.841 |
SDW57009.1 | SDW57192.1 | SAMN04488238_102423 | SAMN04488238_102428 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Predicted N-formylglutamate amidohydrolase. | 0.796 |
SDW57009.1 | SDW57221.1 | SAMN04488238_102423 | SAMN04488238_102429 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Transcriptional regulator, RpiR family. | 0.796 |
SDW57009.1 | SDW96991.1 | SAMN04488238_102423 | SAMN04488238_104329 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.677 |
SDW57009.1 | SDX33810.1 | SAMN04488238_102423 | SAMN04488238_107153 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.838 |
SDW57009.1 | gcvP | SAMN04488238_102423 | SAMN04488238_106227 | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.536 |
SDW57048.1 | SDW56971.1 | SAMN04488238_102424 | SAMN04488238_102422 | Glutamine synthetase. | Hypothetical protein. | 0.786 |
SDW57048.1 | SDW57009.1 | SAMN04488238_102424 | SAMN04488238_102423 | Glutamine synthetase. | Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. | 0.865 |
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