Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW43751.1 | SDW43793.1 | SAMN04488238_10270 | SAMN04488238_10271 | Hypothetical protein. | Transporter family-2 protein. | 0.562 |
SDW43751.1 | SDW43826.1 | SAMN04488238_10270 | SAMN04488238_10272 | Hypothetical protein. | Transporter family-2 protein. | 0.562 |
SDW43793.1 | SDW43751.1 | SAMN04488238_10271 | SAMN04488238_10270 | Transporter family-2 protein. | Hypothetical protein. | 0.562 |
SDW43793.1 | SDW43826.1 | SAMN04488238_10271 | SAMN04488238_10272 | Transporter family-2 protein. | Transporter family-2 protein. | 0.992 |
SDW43793.1 | SDW43861.1 | SAMN04488238_10271 | SAMN04488238_10273 | Transporter family-2 protein. | Hypothetical protein. | 0.409 |
SDW43793.1 | SDW43884.1 | SAMN04488238_10271 | SAMN04488238_10274 | Transporter family-2 protein. | fatty-acyl-CoA synthase. | 0.409 |
SDW43793.1 | SDW75113.1 | SAMN04488238_10271 | SAMN04488238_103257 | Transporter family-2 protein. | Tripartite tricarboxylate transporter TctB family protein. | 0.492 |
SDW43793.1 | SDX36107.1 | SAMN04488238_10271 | SAMN04488238_107227 | Transporter family-2 protein. | Transporter family-2 protein. | 0.528 |
SDW43793.1 | pyrE | SAMN04488238_10271 | SAMN04488238_105101 | Transporter family-2 protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.408 |
SDW43793.1 | pyrE-2 | SAMN04488238_10271 | SAMN04488238_108186 | Transporter family-2 protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.408 |
SDW43793.1 | pyrF | SAMN04488238_10271 | SAMN04488238_104190 | Transporter family-2 protein. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.475 |
SDW43826.1 | SDW43751.1 | SAMN04488238_10272 | SAMN04488238_10270 | Transporter family-2 protein. | Hypothetical protein. | 0.562 |
SDW43826.1 | SDW43793.1 | SAMN04488238_10272 | SAMN04488238_10271 | Transporter family-2 protein. | Transporter family-2 protein. | 0.992 |
SDW43826.1 | SDW43861.1 | SAMN04488238_10272 | SAMN04488238_10273 | Transporter family-2 protein. | Hypothetical protein. | 0.409 |
SDW43826.1 | SDW43884.1 | SAMN04488238_10272 | SAMN04488238_10274 | Transporter family-2 protein. | fatty-acyl-CoA synthase. | 0.409 |
SDW43826.1 | SDW75113.1 | SAMN04488238_10272 | SAMN04488238_103257 | Transporter family-2 protein. | Tripartite tricarboxylate transporter TctB family protein. | 0.498 |
SDW43826.1 | SDW79056.1 | SAMN04488238_10272 | SAMN04488238_103359 | Transporter family-2 protein. | Peptide/nickel transport system substrate-binding protein. | 0.450 |
SDW43826.1 | SDX36107.1 | SAMN04488238_10272 | SAMN04488238_107227 | Transporter family-2 protein. | Transporter family-2 protein. | 0.422 |
SDW43826.1 | pyrE | SAMN04488238_10272 | SAMN04488238_105101 | Transporter family-2 protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.408 |
SDW43826.1 | pyrE-2 | SAMN04488238_10272 | SAMN04488238_108186 | Transporter family-2 protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.408 |
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