STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW44394.1Pyrroline-5-carboxylate reductase. (237 aa)    
Predicted Functional Partners:
SDW44357.1
Proline racemase.
 
  
 0.925
SDW96991.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 0.921
SDW44323.1
Proline racemase.
 
  
 0.882
SDW44292.1
Pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.760
SDX65136.1
Ornithine cyclodeaminase.
   
 
 0.664
SDX65163.1
Ornithine cyclodeaminase.
   
 
 0.664
SDX07977.1
Proline racemase; Belongs to the proline racemase family.
     
 0.612
SDW44255.1
Transcriptional regulator, TetR family.
 
     0.576
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.561
SDX33810.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.541
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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