Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW28336.1 | SDW68875.1 | SAMN04488238_101541 | SAMN04488238_103102 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Cell division protein ZapE. | 0.531 |
SDW28336.1 | SDW90701.1 | SAMN04488238_101541 | SAMN04488238_104151 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.603 |
SDW28336.1 | SDW90863.1 | SAMN04488238_101541 | SAMN04488238_104155 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Succinate dehydrogenase subunit C. | 0.439 |
SDW28336.1 | ubiG | SAMN04488238_101541 | SAMN04488238_107157 | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.485 |
SDW68875.1 | SDW28336.1 | SAMN04488238_103102 | SAMN04488238_101541 | Cell division protein ZapE. | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | 0.531 |
SDW68875.1 | SDW68910.1 | SAMN04488238_103102 | SAMN04488238_103103 | Cell division protein ZapE. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.570 |
SDW68875.1 | SDW68946.1 | SAMN04488238_103102 | SAMN04488238_103104 | Cell division protein ZapE. | Acetyltransferase (GNAT) domain-containing protein. | 0.501 |
SDW68875.1 | SDW90701.1 | SAMN04488238_103102 | SAMN04488238_104151 | Cell division protein ZapE. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.785 |
SDW68875.1 | SDW90783.1 | SAMN04488238_103102 | SAMN04488238_104153 | Cell division protein ZapE. | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.787 |
SDW68875.1 | SDW90863.1 | SAMN04488238_103102 | SAMN04488238_104155 | Cell division protein ZapE. | Succinate dehydrogenase subunit C. | 0.582 |
SDW68875.1 | SDX09031.1 | SAMN04488238_103102 | SAMN04488238_105148 | Cell division protein ZapE. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | 0.700 |
SDW68875.1 | SDX30082.1 | SAMN04488238_103102 | SAMN04488238_10732 | Cell division protein ZapE. | Hypothetical protein. | 0.514 |
SDW68875.1 | radA | SAMN04488238_103102 | SAMN04488238_102251 | Cell division protein ZapE. | DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.539 |
SDW68875.1 | ubiG | SAMN04488238_103102 | SAMN04488238_107157 | Cell division protein ZapE. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.536 |
SDW68910.1 | SDW68875.1 | SAMN04488238_103103 | SAMN04488238_103102 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Cell division protein ZapE. | 0.570 |
SDW68910.1 | SDW68946.1 | SAMN04488238_103103 | SAMN04488238_103104 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Acetyltransferase (GNAT) domain-containing protein. | 0.977 |
SDW68910.1 | SDW90783.1 | SAMN04488238_103103 | SAMN04488238_104153 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.463 |
SDW68946.1 | SDW68875.1 | SAMN04488238_103104 | SAMN04488238_103102 | Acetyltransferase (GNAT) domain-containing protein. | Cell division protein ZapE. | 0.501 |
SDW68946.1 | SDW68910.1 | SAMN04488238_103104 | SAMN04488238_103103 | Acetyltransferase (GNAT) domain-containing protein. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.977 |
SDW90701.1 | SDW28336.1 | SAMN04488238_104151 | SAMN04488238_101541 | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | 0.603 |
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