STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW74500.1Tripartite-type tricarboxylate transporter, receptor component TctC. (351 aa)    
Predicted Functional Partners:
SDW74326.1
TctA family transporter.
 
    0.781
SDW74539.1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
     0.745
SDW75184.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.564
SDW44554.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.517
SDW74459.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.512
SDW74589.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
       0.490
SDW44774.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.480
SDX05839.1
2-methylcitrate dehydratase PrpD.
 
    0.463
SDX29201.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.454
SDW74411.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    
0.446
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.