STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nnrDyjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family. (491 aa)    
Predicted Functional Partners:
SDX23105.1
ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family.
   
 0.975
SDX22715.1
Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family.
   
 0.970
SDX43012.1
ATP-dependent RNA helicase RhlE.
   
 0.970
SDX48672.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
 
 0.956
SDW15330.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
  
 0.950
rppH
Putative (di)nucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
  
 0.950
SDW87152.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
  
 0.950
SDW87227.1
8-oxo-dGTP diphosphatase.
  
 0.950
SDX22685.1
Nudix-type nucleoside diphosphatase, YffH/AdpP family.
  
 0.950
SDX82543.1
Protein of unknown function.
  
 0.950
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
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