STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW78105.1Fused signal recognition particle receptor/colicin import membrane protein. (128 aa)    
Predicted Functional Partners:
SDW78151.1
Hypothetical protein.
       0.773
SDW78187.1
Phage head-tail adaptor, putative, SPP1 family.
       0.773
SDW78220.1
Bacteriophage HK97-gp10, putative tail-component.
       0.768
SDW78259.1
Protein of unknown function.
       0.768
SDW78293.1
Hypothetical protein.
       0.768
SDW78332.1
Hypothetical protein.
       0.768
SDW78066.1
Phage major capsid protein, HK97 family.
       0.620
SDW77921.1
Hypothetical protein.
       0.600
SDW77956.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
       0.600
SDW77995.1
Phage portal protein, HK97 family.
       0.600
Your Current Organism:
Roseicitreum antarcticum
NCBI taxonomy Id: 564137
Other names: CGMCC 1.8894, LMG 24863, LMG:24863, R. antarcticum, Rhodobacter sp. ZS2-28, Roseicitreum antarcticum Yu et al. 2011, strain ZS2-28
Server load: low (14%) [HD]