Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDW25315.1 | SDW44908.1 | SAMN04488238_101473 | SAMN04488238_102101 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | Phosphate acetyltransferase. | 0.753 |
| SDW25315.1 | SDW72411.1 | SAMN04488238_101473 | SAMN04488238_103188 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | methylmalonyl-CoA mutase. | 0.525 |
| SDW25315.1 | SDW89158.1 | SAMN04488238_101473 | SAMN04488238_104106 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.811 |
| SDW25315.1 | SDW90521.1 | SAMN04488238_101473 | SAMN04488238_104146 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | (R)-ethylmalonyl-CoA mutase. | 0.769 |
| SDW25315.1 | sucC | SAMN04488238_101473 | SAMN04488238_104162 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.809 |
| SDW25315.1 | sucD | SAMN04488238_101473 | SAMN04488238_104163 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.800 |
| SDW44908.1 | SDW25315.1 | SAMN04488238_102101 | SAMN04488238_101473 | Phosphate acetyltransferase. | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.753 |
| SDW44908.1 | SDW72411.1 | SAMN04488238_102101 | SAMN04488238_103188 | Phosphate acetyltransferase. | methylmalonyl-CoA mutase. | 0.685 |
| SDW44908.1 | SDW89158.1 | SAMN04488238_102101 | SAMN04488238_104106 | Phosphate acetyltransferase. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.788 |
| SDW44908.1 | SDW90521.1 | SAMN04488238_102101 | SAMN04488238_104146 | Phosphate acetyltransferase. | (R)-ethylmalonyl-CoA mutase. | 0.685 |
| SDW44908.1 | SDW91023.1 | SAMN04488238_102101 | SAMN04488238_104159 | Phosphate acetyltransferase. | (3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family. | 0.753 |
| SDW44908.1 | SDX51318.1 | SAMN04488238_102101 | SAMN04488238_10994 | Phosphate acetyltransferase. | glutaryl-CoA dehydrogenase. | 0.753 |
| SDW44908.1 | sucC | SAMN04488238_102101 | SAMN04488238_104162 | Phosphate acetyltransferase. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.879 |
| SDW44908.1 | sucD | SAMN04488238_102101 | SAMN04488238_104163 | Phosphate acetyltransferase. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.902 |
| SDW72411.1 | SDW25315.1 | SAMN04488238_103188 | SAMN04488238_101473 | methylmalonyl-CoA mutase. | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.525 |
| SDW72411.1 | SDW44908.1 | SAMN04488238_103188 | SAMN04488238_102101 | methylmalonyl-CoA mutase. | Phosphate acetyltransferase. | 0.685 |
| SDW72411.1 | SDW89158.1 | SAMN04488238_103188 | SAMN04488238_104106 | methylmalonyl-CoA mutase. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.885 |
| SDW72411.1 | SDW90521.1 | SAMN04488238_103188 | SAMN04488238_104146 | methylmalonyl-CoA mutase. | (R)-ethylmalonyl-CoA mutase. | 0.999 |
| SDW72411.1 | SDW91023.1 | SAMN04488238_103188 | SAMN04488238_104159 | methylmalonyl-CoA mutase. | (3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family. | 0.525 |
| SDW72411.1 | SDX51318.1 | SAMN04488238_103188 | SAMN04488238_10994 | methylmalonyl-CoA mutase. | glutaryl-CoA dehydrogenase. | 0.752 |
page 1 of 4