Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW22577.1 | SDW75782.1 | SAMN04488238_101412 | SAMN04488238_103273 | Outer membrane protein OmpA. | Flagellar motor switch protein FliG. | 0.469 |
SDW22577.1 | SDW92734.1 | SAMN04488238_101412 | SAMN04488238_104213 | Outer membrane protein OmpA. | Transglycosylase SLT domain-containing protein. | 0.431 |
SDW22577.1 | SDW92862.1 | SAMN04488238_101412 | SAMN04488238_104217 | Outer membrane protein OmpA. | OmpA family protein. | 0.481 |
SDW75782.1 | SDW22577.1 | SAMN04488238_103273 | SAMN04488238_101412 | Flagellar motor switch protein FliG. | Outer membrane protein OmpA. | 0.469 |
SDW75782.1 | SDW92734.1 | SAMN04488238_103273 | SAMN04488238_104213 | Flagellar motor switch protein FliG. | Transglycosylase SLT domain-containing protein. | 0.490 |
SDW75782.1 | SDX23637.1 | SAMN04488238_103273 | SAMN04488238_106172 | Flagellar motor switch protein FliG. | Flagellum-specific ATP synthase. | 0.990 |
SDW75782.1 | fliE | SAMN04488238_103273 | SAMN04488238_106175 | Flagellar motor switch protein FliG. | Flagellar hook-basal body complex protein FliE. | 0.972 |
SDW92734.1 | SDW22577.1 | SAMN04488238_104213 | SAMN04488238_101412 | Transglycosylase SLT domain-containing protein. | Outer membrane protein OmpA. | 0.431 |
SDW92734.1 | SDW75782.1 | SAMN04488238_104213 | SAMN04488238_103273 | Transglycosylase SLT domain-containing protein. | Flagellar motor switch protein FliG. | 0.490 |
SDW92734.1 | SDW92766.1 | SAMN04488238_104213 | SAMN04488238_104214 | Transglycosylase SLT domain-containing protein. | Hypothetical protein. | 0.689 |
SDW92734.1 | SDW92862.1 | SAMN04488238_104213 | SAMN04488238_104217 | Transglycosylase SLT domain-containing protein. | OmpA family protein. | 0.451 |
SDW92734.1 | SDW93007.1 | SAMN04488238_104213 | SAMN04488238_104222 | Transglycosylase SLT domain-containing protein. | TPR repeat-containing protein. | 0.459 |
SDW92734.1 | SDW93044.1 | SAMN04488238_104213 | SAMN04488238_104223 | Transglycosylase SLT domain-containing protein. | Flp pilus assembly protein TadD, contains TPR repeats. | 0.449 |
SDW92734.1 | SDW93074.1 | SAMN04488238_104213 | SAMN04488238_104224 | Transglycosylase SLT domain-containing protein. | Prepilin peptidase CpaA. | 0.420 |
SDW92734.1 | SDX21848.1 | SAMN04488238_104213 | SAMN04488238_106108 | Transglycosylase SLT domain-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.426 |
SDW92734.1 | SDX23637.1 | SAMN04488238_104213 | SAMN04488238_106172 | Transglycosylase SLT domain-containing protein. | Flagellum-specific ATP synthase. | 0.535 |
SDW92734.1 | fliE | SAMN04488238_104213 | SAMN04488238_106175 | Transglycosylase SLT domain-containing protein. | Flagellar hook-basal body complex protein FliE. | 0.432 |
SDW92766.1 | SDW92734.1 | SAMN04488238_104214 | SAMN04488238_104213 | Hypothetical protein. | Transglycosylase SLT domain-containing protein. | 0.689 |
SDW92766.1 | SDW92862.1 | SAMN04488238_104214 | SAMN04488238_104217 | Hypothetical protein. | OmpA family protein. | 0.519 |
SDW92766.1 | SDW93007.1 | SAMN04488238_104214 | SAMN04488238_104222 | Hypothetical protein. | TPR repeat-containing protein. | 0.817 |
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